Rank edge weights for GRNs and calculate average across different methods

Rank edge weights for GRNs and calculate average across different methods

Usage

grn_average_rank(list_edges)

Arguments

list_edges

List containing edge lists as returned by the function grn_combined.

Value

Edge list containing regulator, target and mean rank from all algorithms.

Examples

data(filt.se)
tfs <- sample(rownames(filt.se), size=50, replace=FALSE)
grn_list <- grn_combined(filt.se, regulators=tfs, nTrees=2)
ranked_grn <- grn_average_rank(grn_list)