Perform phylogenomic profiling for synteny network clusters

Usage

phylogenomic_profile(clusters = NULL)

Arguments

clusters: A 2-column data frame with variables Gene and Cluster as returned by cluster_network.

Value

A matrix of i rows and j columns containing the number of genes in cluster i for each species j. The number of rows is equal to the number of clusters in clusters, and the number of columns is equal to the number of species in clusters.

Examples

data(clusters)
profiles <- phylogenomic_profile(clusters)