Get transcript-to-gene mapping
Usage
get_tx2gene(species, transcripts = c("all", "longest"))
Arguments
- species
Character vector of PLAZA species IDs.
- transcripts
Character indicating what transcripts to use for each
gene. One of 'all' (all transcripts for each gene), or 'longest'
(only longest transcript for each gene).
Value
A 2-column data frame with columns
transcript_id (character) and gene_id (character)
Examples
species <- "ota"
tx2gene <- get_tx2gene(species, "all")
