Get mapping between alternative IDs — get_functional_annotation • rplaza

Get mapping between alternative IDs

Usage

get_functional_annotation(species, ontology = c("GO", "MapMan", "InterPro"))

Arguments

species: Character vector of PLAZA species IDs.
ontology: Character indicating what ontology to use to extract functional annotation. One of 'GO' (Gene Ontology), 'MapMan', or 'InterPro'.

Value

A data frame with functional annotation terms for all genes.

Examples

fannot <- get_functional_annotation("ota", "MapMan")