Orthogroups from a set of model organisms obtained from
OrthoFinder2' example output, which was then passed
to get_og_overlap() to get shared orthogroups.
Usage
data(og_overlap_model)Format
A 3-column data frame with the following variables:
- sp1
Character, name of species 1.
- sp2
Character, name of species 2.
- og_overlap
Numeric, number of shared orthogroups.
References
Emms, D. M., & Kelly, S. (2019). OrthoFinder: phylogenetic orthology inference for comparative genomics. Genome biology, 20(1), 1-14.
Examples
data(og_overlap_model)